Khakhar, A., Wang, C., Swanson, R., Stokke, S., Rizvi, F., Sarup, S., Hobbs, J., & Voytas, D. F. (2021). VipariNama: RNA viral vectors to rapidly elucidate the relationship between gene expression and phenotype. Plant Physiology.

Khakhar, A., & Voytas, D. F. (2021). RNA viral vectors for accelerating plant synthetic biology. Frontiers in Plant Science, 12, 1142.


Khakhar A.*, Starker, C. G., Chamness, J. C., Lee, N., Stokke, S., Wang, C., Swanson, R., Rizvi, F., Imaizumi, T. & Voytas, D. F. (2020) “Building customizable auto-luminescent luciferase-based reporters in plants.” eLife 9, e52786


Khakhar A.*, Leydon A., Lemmex A. Klavins E., Nemhauser J. (2018) "Synthetic hormone-responsive transcription factors can monitor and re-program plant development." eLife 7: e34702.

Galli M.*, Khakhar A., Chen Z., Lu Z., Sen S., Joshi T., Schmitz R., Nemhauser J., Gallavotti A. (2018) "The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family." Nature communications 9.1 (2018): 4526.


Groves B.*, Khakhar A.*, Nadel, C. M., Gardner, R. G., & Seelig, G. (2016). “Rewiring MAP kinases in Saccharomyces cerevisiae to regulate novel targets through ubiquitination.” eLife, 5, e15200

Khakhar A.*, Bolten N. J.*, Nemhauser, J., & Klavins, E. (2016). “Cell–Cell Communication in Yeast Using Auxin Biosynthesis and Auxin Responsive CRISPR Transcription Factors.” ACS Synthetic Biology 5, 279–286

Pochekailov, S.*, Black, R. R., Chavali, V. P., Khakhar, A., & Seelig, G. (2016). A fluorescent readout for the oxidation state of electron transporting proteins in cell free settings. ACS synthetic biology, 5(7), 662-671.


Wright, R. C*., Khakhar, A., Eshleman, J. R., & Ostermeier, M. (2014). “Advancements in the Development of HIF-1α-Activated Protein Switches for Use in Enzyme Prodrug Therapy.” PloS one, 9(11), e114032.